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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
27/04/2021 |
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Actualizado : |
10/08/2021 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
QUERO, G.; SIMONDI, S.; CERETTA, S.; OTERO, A.; GARAYCOCHEA, S.; FERNANDEZ, S.; BORSANI, O.; BONNECARRERE, V. |
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Afiliación : |
GASTÓN QUERO CORRALLO, Dep. de Biología Vegetal, Facultad de Agronomía, Univ. de la República, Montevideo, Uruguay; SEBASTIÁN SIMONDI, Area de Matemática, Facultad de Ciencias Exactas y Naturales, Univ. Nacional de Cuyo (FCEN-UNCuyo), Mendoza, Argentina; SERGIO EDUARDO CERETTA SORIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ALVARO RICARDO OTERO CAMA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SILVIA RAQUEL GARAYCOCHEA SOLSONA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SCHUBERT DANIEL FERNANDEZ REGGIARDO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; OMAR BORSANI, Dep. de Biología Vegetal, Facultad de Agronomía, Univ. de la República, Montevideo, Uruguay; MARIA VICTORIA BONNECARRERE MARTINEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
An integrative analysis of yield stability for a GWAS in a small soybean breeding population. |
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Fecha de publicación : |
2021 |
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Fuente / Imprenta : |
Crop Science, May 2021, volume 61, issue 3, pages 19003-1914. Doi: https://doi.org/10.1002/csc2.20490 |
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ISSN : |
0011-183X |
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DOI : |
10.1002/csc2.20490 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received, 3 November 2020; Accepted, 11 February 2021; Published online, 14 April 2021.
Associate Editor: Junping Chen.
The authors thank Edgardo Rey and Wanda Iriarte for technical assistance in field experiment and laboratory works, respectively. They also thank Monika Kavanova for her contribution to data interpretation and discussion. This work was financially supported by the following projects: Innovagro FSA_1_2013_1_12924, funded by ANII (Agencia Nacional de Investigación e Innovación), and Red Nacional de Biotecnología Agrícola RTS_1_2014_1, funded by ANII, INIA (Instituto Nacional de Investigación Agropecuaria), Barraca Erro S.A., Lebu SRL, Fadisol SA, CALMER, and COPAGRAN.
Author Contributions: Gastón Quero: Conceptualization, Formal analysis, Investigation, Methodology, Writing‐original draft, Writing‐review & editing. Sebastián Simondi: Data curation, Formal analysis. Sergio Ceretta: Investigation, Methodology. Álvaro Otero: Methodology. Silvia Garaycochea: Methodology, Software. Schubert Fernández: Software. Omar Borsani: Supervision. Victoria Bonnecarrère: Conceptualization, Funding acquisition, Project administration, Supervision, Writing‐original draft, Writing‐review & editing.
Corresponding author: Victoria Bonnecarrère, Instituto Nacional de InvestigaciónAgropecuaria (INIA),Unidad de Biotecnología y Programa de Cultivo de Secano, Estación Experimental INIA Las Brujas,Ruta 48 km10, Canelones,Uruguay. Email: vbonnecarrere@inia.org.uy |
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Contenido : |
ABSTRACT.
Drought stress is one of the most important factors limiting soybean [Glycine max (L.) Merr.] productivity and reducing yield stability. Soybean breeders need phenotypic and genotypic tools to improve drought stress tolerance, but most of available strategies are expensive and unaffordable for small-scale public breeding programs. In this study, elite germplasm of a locally adapted breeding population was used to estimate a yield stability index as an indicator of drought response. In order to associate yield stability of analyzed genotypes to drought response, water deficit scenarios related to the crop cycle group were defined. Four groups of genotypes were identified in relation to yield stability: two groups showed stables yield (without interaction with water deficit scenarios), and two groups showed unstable yield (with crossover interaction with water deficit scenarios). This phenotypic information was used to identify genomic regions and candidate genes associated with yield stability index. A new method for the definition of a quantitative trait loci (QTL) region was developed based on the probability of marker pairwise of belonging to four linkage disequilibrium (LD) categories. Seven QTL were found and their implication on drought tolerance was further supported by linkage to previously reported QTL for water use efficiency trait. © 2021 The Authors. Crop Science © 2021 Crop Science Society of America |
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Palabras claves : |
Drought stress; GBS - Genotyping by sequencing; GWAS - Genome-wide association study. |
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Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
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Marc : |
LEADER 03833naa a2200277 a 4500
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008 2021 bl uuuu u00u1 u #d
022 $a0011-183X
024 7 $a10.1002/csc2.20490$2DOI
100 1 $aQUERO, G.
245 $aAn integrative analysis of yield stability for a GWAS in a small soybean breeding population.$h[electronic resource]
260 $c2021
500 $aArticle history: Received, 3 November 2020; Accepted, 11 February 2021; Published online, 14 April 2021. Associate Editor: Junping Chen. The authors thank Edgardo Rey and Wanda Iriarte for technical assistance in field experiment and laboratory works, respectively. They also thank Monika Kavanova for her contribution to data interpretation and discussion. This work was financially supported by the following projects: Innovagro FSA_1_2013_1_12924, funded by ANII (Agencia Nacional de Investigación e Innovación), and Red Nacional de Biotecnología Agrícola RTS_1_2014_1, funded by ANII, INIA (Instituto Nacional de Investigación Agropecuaria), Barraca Erro S.A., Lebu SRL, Fadisol SA, CALMER, and COPAGRAN. Author Contributions: Gastón Quero: Conceptualization, Formal analysis, Investigation, Methodology, Writing‐original draft, Writing‐review & editing. Sebastián Simondi: Data curation, Formal analysis. Sergio Ceretta: Investigation, Methodology. Álvaro Otero: Methodology. Silvia Garaycochea: Methodology, Software. Schubert Fernández: Software. Omar Borsani: Supervision. Victoria Bonnecarrère: Conceptualization, Funding acquisition, Project administration, Supervision, Writing‐original draft, Writing‐review & editing. Corresponding author: Victoria Bonnecarrère, Instituto Nacional de InvestigaciónAgropecuaria (INIA),Unidad de Biotecnología y Programa de Cultivo de Secano, Estación Experimental INIA Las Brujas,Ruta 48 km10, Canelones,Uruguay. Email: vbonnecarrere@inia.org.uy
520 $aABSTRACT. Drought stress is one of the most important factors limiting soybean [Glycine max (L.) Merr.] productivity and reducing yield stability. Soybean breeders need phenotypic and genotypic tools to improve drought stress tolerance, but most of available strategies are expensive and unaffordable for small-scale public breeding programs. In this study, elite germplasm of a locally adapted breeding population was used to estimate a yield stability index as an indicator of drought response. In order to associate yield stability of analyzed genotypes to drought response, water deficit scenarios related to the crop cycle group were defined. Four groups of genotypes were identified in relation to yield stability: two groups showed stables yield (without interaction with water deficit scenarios), and two groups showed unstable yield (with crossover interaction with water deficit scenarios). This phenotypic information was used to identify genomic regions and candidate genes associated with yield stability index. A new method for the definition of a quantitative trait loci (QTL) region was developed based on the probability of marker pairwise of belonging to four linkage disequilibrium (LD) categories. Seven QTL were found and their implication on drought tolerance was further supported by linkage to previously reported QTL for water use efficiency trait. © 2021 The Authors. Crop Science © 2021 Crop Science Society of America
653 $aDrought stress
653 $aGBS - Genotyping by sequencing
653 $aGWAS - Genome-wide association study
700 1 $aSIMONDI, S.
700 1 $aCERETTA, S.
700 1 $aOTERO, A.
700 1 $aGARAYCOCHEA, S.
700 1 $aFERNANDEZ, S.
700 1 $aBORSANI, O.
700 1 $aBONNECARRERE, V.
773 $tCrop Science, May 2021, volume 61, issue 3, pages 19003-1914. Doi: https://doi.org/10.1002/csc2.20490
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| Registros recuperados : 27 | |
| 6. |  | MANZI, M.; BORSANI, O.; DÍAZ, P.; RIVAS, F. Relationship between Flower Intensity, Oxidative Damage and Protection in Citrus under Water Stress Conditions. Acta Horticulturae, 2015, no.1065, p. 1243-1250. [Conference Paper] Proc. XII International Citrus Congress - International Society of Citriculture. Eds. B. Sabater-Muñoz, P. Moreno, L. Peña, L. Navarro (3 vols.)| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 8. | | IRISARRI, P.; SOTELO, M.; CASARETTO, E.; BORSANI, O.; ZARZA, R.; REBUFFO, M.; MONZA, J. Diversidad genética de rizobios nativos aislados de nódulos de Lotus corniculatus en Uruguay. In: SIMPOSIO DE RECURSOS GENÉTICOS PARA AMERICA LATINA Y EL CARIBE, 7., 2009, Pucón, CL. Proceedings. [Temuco, CL: INIA], 2009. v. 2, p. 81-82.| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA La Estanzuela. |
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| 9. | | GALLINO, J.P.; RUIBAL, C.; CASARETTO, E.; FLEITAS, A.L.; BONNECARRERE, V.; BORSANI, O.; VIDAL, S. A dehydration-induced eukaryotic translation initiation factor iso4G identified in a slow wilting soybean cultivar enhances abiotic stress tolerance in Arabidopsis. Frontiers in Plant Science, 2018, v.9, Article number 262. (2 March 2018). OPEN ACCESS Article history: Received: 22 December 2017; Accepted: 14 February 2018; Published: 02 March 2018.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 10. | | CASTILLO, A.; REBUFFO, M.; DALLA RIZZA, M.; FOLLE, G.; SANTIÑAQUE, F.; BORSANI, O.; MONZA, J. Generation and characterization of interspecific hybrids of Lotus uliginosus × Lotus corniculatus. Crop Science, 2012, v. 52, no. 4, p. 1572-1582. Article history: Published July, 2012.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 1 |
| Biblioteca(s): INIA La Estanzuela; INIA Las Brujas. |
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| 12. | | QUERO, G.; BONNECARRERE, V.; FERNÁNDEZ, S.; SILVA, P.; SIMONDI, S.; BORSANI, O. La eficiencia del uso de luz y la partición energética en arroz es genotipo dependiente. [resumen] In: INIA (Instituto Nacional de Investigación Agropecuaria); INIA Las Brujas; Biotecnología. Jornada de Agrobiotecnología, XI. Encuentro Nacional de REDBIO, III. Jornada técnica. Las Brujas, Canelones (UY): INIA, 2018. p.8-9 (Serie Actividades de Difusión; 786)| Biblioteca(s): INIA Las Brujas. |
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| 13. | | BORSANI, O.; CASARETTO, E.; MÁRQUEZ, A.J.; REBUFFO, M.; DÍAZ, P.; MONZA, J. Metabolismo de prolina en cultivares de Trifolium pratense con diferente producción estival. In: BONETE, M.J.; MARTÍNEZ-ESPINOSA, R.M. (Coord.). Avances en el metabolismo del nitrógeno: de la genómica y la proteómica a las aplicaciones agronómicas, industriales y medioambientales. [San Vicente, Alicante], ES: Club Universitario, 2010. p. 319-325.| Tipo: Capítulo en Libro Técnico-Científico |
| Biblioteca(s): INIA La Estanzuela. |
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| 14. | | QUERO, G.; SIMONDI, S.; CERETTA, S.; OTERO, A.; GARAYCOCHEA, S.; FERNANDEZ, S.; BORSANI, O.; BONNECARRERE, V. An integrative analysis of yield stability for a GWAS in a small soybean breeding population. Crop Science, May 2021, volume 61, issue 3, pages 19003-1914. Doi: https://doi.org/10.1002/csc2.20490 Article history: Received, 3 November 2020; Accepted, 11 February 2021; Published online, 14 April 2021.
Associate Editor: Junping Chen.
The authors thank Edgardo Rey and Wanda Iriarte for technical assistance in field experiment and...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 17. | | MESSA, A.; SALDIAS, R.; CASTILLO, A.; MONZA, J.; BORSANI, O.; REBUFFO, M. Seed yield components in F2 genotypes of interspecific hybrids of Lotus uliginosus and Lotus japonicus. Lotus Newsletter, 2008, Volume 38, Issue 2, pages 62-63.| Tipo: Artículos Indexados |
| Biblioteca(s): INIA La Estanzuela. |
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| 18. | | SIMONDI, S.; CASARETTO, E.; QUERO, S.; CERETTA, S.; BONNECARRERE, V.; BORSANI, O. A simple and accurate method based on a water-consumption model for phenotyping soybean genotypes under hydric deficit conditions. Agronomy, 2022, Volume 12, Issue 3, Article number 575. GOLD OPEN ACCESS. doi: https://doi.org/10.3390/agronomy12030575 Article history: Received 14 December 2021; Revised 17 February 2022; Accepted 24 February 2022; Published 25 February 2022.
Corresponding author: Borsani, O.; Departamento de Biología Vegetal, Facultad de Agronomía, Universidad de la...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| Registros recuperados : 27 | |
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